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acvr1ba activin A receptor type 1Ba [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105928975, updated on 20-Aug-2024

Summary

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Gene symbol
acvr1ba
Gene description
activin A receptor type 1Ba
See related
EnsemblRapid:ENSFHEG00000026587
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
acvr1b
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 1 NC_046361.1 (21132800..21154876)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234302.1 (1089099..1113173, complement)

Chromosome 1 - NC_046361.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 33Aa Neighboring gene activin A receptor like type 1 Neighboring gene lysine (K)-specific methyltransferase 2D Neighboring gene desert hedgehog signaling molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables activin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables activin receptor activity, type I IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of activin receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activin A receptor type 1Ba
Names
Activin receptor type-1B
activin A receptor type 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046361.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    21132800..21154876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036137729.1 → XP_035993622.1  activin A receptor type 1Ba isoform X1

    Conserved Domains (2) summary
    cd14143
    Location:203 → 527
    STKc_TGFbR1_ACVR1b_ACVR1c; Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I Receptor and Activin Type IB/IC Receptors
    pfam08515
    Location:170 → 197
    TGF_beta_GS; Transforming growth factor beta type I GS-motif

  2. XM_012866557.3 → XP_012722011.1  activin A receptor type 1Ba isoform X2

    UniProtKB/TrEMBL
    A0A147A6C2
    Related
    ENSFHEP00000056040.1, ENSFHET00000065988.1
    Conserved Domains (4) summary
    cd14143
    Location:203 → 490
    STKc_TGFbR1_ACVR1b_ACVR1c; Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I Receptor and Activin Type IB/IC Receptors
    pfam07714
    Location:199 → 486
    Pkinase_Tyr; Protein tyrosine kinase
    pfam08515
    Location:170 → 197
    TGF_beta_GS; Transforming growth factor beta type I GS-motif
    cl10471
    Location:39 → 98
    LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
Nucleotide Protein
Heading Accession and Version

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