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ppat phosphoribosyl pyrophosphate amidotransferase [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105928885, updated on 20-Aug-2024

Summary

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Gene symbol
ppat
Gene description
phosphoribosyl pyrophosphate amidotransferase
See related
EnsemblRapid:ENSFHEG00000001153
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 9 NC_046369.1 (30965968..30982133)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234301.1 (98528..112824, complement)

Chromosome 9 - NC_046369.1Genomic Context describing neighboring genes Neighboring gene neural retina leucine zipper Neighboring gene GTP-binding protein REM 2 Neighboring gene phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase Neighboring gene uncharacterized LOC105928884 Neighboring gene aminoadipate-semialdehyde dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amidophosphoribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amidophosphoribosyltransferase
Names
Amidophosphoribosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046369.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    30965968..30982133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036141471.1 → XP_035997364.1  amidophosphoribosyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A3Q2NNE4
    Conserved Domains (1) summary
    COG0034
    Location:1 → 434
    PurF; Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

  2. XM_021318433.2 → XP_021174108.2  amidophosphoribosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A3Q2NNE4
    Related
    ENSFHEP00000056903.1, ENSFHET00000038770.1
    Conserved Domains (1) summary
    COG0034
    Location:10 → 498
    PurF; Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

  3. XM_012866412.3 → XP_012721866.2  amidophosphoribosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3Q2NNE4
    Related
    ENSFHEP00000000435.2, ENSFHET00000015530.2
    Conserved Domains (1) summary
    COG0034
    Location:10 → 500
    PurF; Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

  4. XM_021318434.2 → XP_021174109.2  amidophosphoribosyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A3Q2NNE4
    Conserved Domains (1) summary
    COG0034
    Location:1 → 434
    PurF; Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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