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npc1l1 NPC1-like 1 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105919441, updated on 20-Aug-2024

Summary

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Gene symbol
npc1l1
Gene description
NPC1-like 1
See related
EnsemblRapid:ENSFHEG00000010671
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
21
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 12 NC_046372.1 (35295316..35315451)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224833.1 (94864..113151, complement)

Chromosome 12 - NC_046372.1Genomic Context describing neighboring genes Neighboring gene polymerase (DNA directed), delta 2, regulatory subunit Neighboring gene non-POU domain containing, octamer-binding Neighboring gene rapamycin-insensitive companion of mTOR Neighboring gene chromosome 12 C5orf34 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NPC1-like intracellular cholesterol transporter 1
Names
NPC1 like intracellular cholesterol transporter 1
Niemann-Pick C1 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046372.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    35295316..35315451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012854755.3 → XP_012710209.2  NPC1-like intracellular cholesterol transporter 1

    UniProtKB/TrEMBL
    A0A3Q2QH58
    Related
    ENSFHEP00000026748.2, ENSFHET00000001916.2
    Conserved Domains (1) summary
    TIGR00917
    Location:27 → 1285
    2A060601; Niemann-Pick C type protein family
Nucleotide Protein
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