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dmxl2 Dmx-like 2 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105916598, updated on 20-Aug-2024

Summary

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Gene symbol
dmxl2
Gene description
Dmx-like 2
See related
EnsemblRapid:ENSFHEG00000008267
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 4
Exon count:
56
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 4 NC_046364.1 (29029476..29084473)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224589.1 (76467..129223)

Chromosome 4 - NC_046364.1Genomic Context describing neighboring genes Neighboring gene semaphorin 6D Neighboring gene uncharacterized LOC118562967 Neighboring gene aromatase Neighboring gene gliomedin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RAVE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dmX-like protein 2
Names
DmX 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046364.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    29029476..29084473
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036136321.1 → XP_035992214.1  dmX-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (4) summary
    PHA03378
    Location:2419 → 2514
    PHA03378; EBNA-3B; Provisional
    sd00039
    Location:2919 → 2959
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2915 → 3128
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_036136324.1 → XP_035992217.1  dmX-like protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (3) summary
    sd00039
    Location:2893 → 2933
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2849 → 3101
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_036136322.1 → XP_035992215.1  dmX-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (4) summary
    PHA03378
    Location:2418 → 2513
    PHA03378; EBNA-3B; Provisional
    sd00039
    Location:2918 → 2958
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2914 → 3127
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_036136323.1 → XP_035992216.1  dmX-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (4) summary
    PHA03378
    Location:2419 → 2514
    PHA03378; EBNA-3B; Provisional
    sd00039
    Location:2899 → 2939
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2855 → 3107
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_036136326.1 → XP_035992219.1  dmX-like protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (3) summary
    sd00039
    Location:2858 → 2898
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2814 → 3066
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_036136328.1 → XP_035992221.1  dmX-like protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (3) summary
    sd00039
    Location:2838 → 2878
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2794 → 3046
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_036136327.1 → XP_035992220.1  dmX-like protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (3) summary
    sd00039
    Location:2857 → 2897
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2813 → 3065
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  8. XM_036136329.1 → XP_035992222.1  dmX-like protein 2 isoform X9

    UniProtKB/TrEMBL
    A0A3Q2U785
    Conserved Domains (3) summary
    sd00039
    Location:2837 → 2877
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1835
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2793 → 3045
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  9. XM_036136325.1 → XP_035992218.1  dmX-like protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2U785
    Related
    ENSFHEP00000058319.1, ENSFHET00000043671.1
    Conserved Domains (4) summary
    PHA03378
    Location:2386 → 2481
    PHA03378; EBNA-3B; Provisional
    sd00039
    Location:2886 → 2926
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1899
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2882 → 3095
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  10. XM_036136330.1 → XP_035992223.1  dmX-like protein 2 isoform X10

    UniProtKB/TrEMBL
    A0A3Q2U785
    Related
    ENSFHEP00000035605.1, ENSFHET00000067190.1
    Conserved Domains (3) summary
    sd00039
    Location:2825 → 2865
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1899
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2781 → 3033
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  11. XM_036136331.1 → XP_035992224.1  dmX-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A3Q2U785
    Related
    ENSFHEP00000055446.1, ENSFHET00000052297.1
    Conserved Domains (3) summary
    sd00039
    Location:2805 → 2845
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1899
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2761 → 3013
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  12. XM_036136332.1 → XP_035992225.1  dmX-like protein 2 isoform X12

    UniProtKB/TrEMBL
    A0A3Q2U785
    Related
    ENSFHEP00000043197.1, ENSFHET00000063921.1
    Conserved Domains (3) summary
    sd00039
    Location:2804 → 2844
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:1162 → 1899
    Rav1p_C; RAVE protein 1 C terminal
    cl29593
    Location:2760 → 3012
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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