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ext2 exostosin glycosyltransferase 2 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105907228, updated on 18-Jun-2024

Summary

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Gene symbol
ext2
Gene description
exostosin glycosyltransferase 2
See related
Ensembl:ENSCHAG00020009659
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 20 NC_045171.1 (21080431..21101926, complement)

Chromosome 20 - NC_045171.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116225179 Neighboring gene uncharacterized LOC116225178 Neighboring gene homeobox protein aristaless-like 4 Neighboring gene tetraspanin-18 Neighboring gene asparagine synthetase [glutamine-hydrolyzing]-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045171.1 Chromosome 20 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045171.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    21080431..21101926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012835517.3 → XP_012690971.2  exostosin-2

    UniProtKB/TrEMBL
    A0A6P3W6L2
    Related
    ENSCHAP00020021071.1, ENSCHAT00020022419.1
    Conserved Domains (2) summary
    pfam03016
    Location:100 → 390
    Exostosin; Exostosin family
    pfam09258
    Location:466 → 707
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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