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LOC105894836 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105894836, updated on 7-Dec-2023

Summary

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Gene symbol
LOC105894836
Gene description
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
fut9
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Genomic context

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Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 15 NC_045166.1 (3489083..3492430, complement)

Chromosome 15 - NC_045166.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 63 Neighboring gene UFM1-specific ligase 1 Neighboring gene eph receptor A7 Neighboring gene uncharacterized LOC116223904

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045166.1 Chromosome 15 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9
Names
fucosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045166.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    3489083..3492430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031581690.2 → XP_031437550.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A6P8GRW6
    Conserved Domains (2) summary
    pfam00852
    Location:194 → 363
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:69 → 178
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_012821387.3 → XP_012676841.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A6P3VNF5
    Conserved Domains (2) summary
    pfam00852
    Location:187 → 356
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 171
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  3. XM_031581693.2 → XP_031437553.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A6P3VNF5
    Conserved Domains (2) summary
    pfam00852
    Location:187 → 356
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 171
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  4. XM_031581691.2 → XP_031437551.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A6P3VNF5
    Conserved Domains (2) summary
    pfam00852
    Location:187 → 356
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 171
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  5. XM_031581692.2 → XP_031437552.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A6P3VNF5
    Conserved Domains (2) summary
    pfam00852
    Location:187 → 356
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 171
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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