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LOC105889705 pannexin-1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105889705, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105889705
Gene description
pannexin-1
See related
Ensembl:ENSCHAG00020000163
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
panx1
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Genomic context

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Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 9 NC_045160.1 (30436699..30447143)

Chromosome 9 - NC_045160.1Genomic Context describing neighboring genes Neighboring gene MRE11 homolog A, double strand break repair nuclease Neighboring gene ferroxidase HEPHL1 Neighboring gene uncharacterized LOC116221953 Neighboring gene disco-interacting protein 2 homolog C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045160.1 Chromosome 9 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of interleukin-1 production IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pannexin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045160.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    30436699..30447143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031574090.2 → XP_031429950.1  pannexin-1

    UniProtKB/TrEMBL
    A0A6P8G2Z9
    Related
    ENSCHAP00020000188.1, ENSCHAT00020000230.1
    Conserved Domains (1) summary
    cl03000
    Location:61 → 210
    Innexin
Nucleotide Protein
Heading Accession and Version

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