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NFIX nuclear factor I X [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105885491, updated on 13-Mar-2024

Summary

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Gene symbol
NFIX
Gene description
nuclear factor I X
See related
Ensembl:ENSMICG00000000785
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 24
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 24 NC_033683.1 (3385175..3485896, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012198685.1 (699800..799288, complement)

Chromosome 24 - NC_033683.1Genomic Context describing neighboring genes Neighboring gene syntaxin 10 Neighboring gene nucleus accumbens associated 1 Neighboring gene tRNA methyltransferase 1 Neighboring gene LYL1 basic helix-loop-helix family member Neighboring gene GADD45G interacting protein 1 Neighboring gene DAN domain BMP antagonist family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear factor 1 X-type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033683.1 Reference Mmur_3.0 Primary Assembly

    Range
    3385175..3485896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012790428.2 → XP_012645882.1  nuclear factor 1 X-type isoform X10

    See identical proteins and their annotated locations for XP_012645882.1

    UniProtKB/TrEMBL
    A0A8C5UKY8, A0A8C5XL43
    Related
    ENSMICP00000033467.1, ENSMICT00000032201.2
    Conserved Domains (3) summary
    pfam10524
    Location:9 → 46
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:213 → 418
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:68 → 170
    MH1; N-terminal Mad Homology 1 (MH1) domain

  2. XM_012790423.2 → XP_012645877.1  nuclear factor 1 X-type isoform X5

    See identical proteins and their annotated locations for XP_012645877.1

    UniProtKB/TrEMBL
    A0A8B7I6T7, A0A8C5UKY8
    Related
    ENSMICP00000049117.1, ENSMICT00000068124.1
    Conserved Domains (3) summary
    cl00055
    Location:68 → 170
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:213 → 502
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:8 → 46
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  3. XM_012790424.2 → XP_012645878.1  nuclear factor 1 X-type isoform X6

    UniProtKB/TrEMBL
    A0A8B7I4T6, A0A8C5UKY8
    Conserved Domains (3) summary
    cl00055
    Location:67 → 169
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:212 → 501
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:7 → 45
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  4. XM_012790431.2 → XP_012645885.1  nuclear factor 1 X-type isoform X13

    UniProtKB/TrEMBL
    A0A8B7I4T9, A0A8C5UKY8
    Conserved Domains (2) summary
    cl00055
    Location:21 → 123
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:166 → 455
    CTF_NFI; CTF/NF-I family transcription modulation region

  5. XM_012790426.2 → XP_012645880.1  nuclear factor 1 X-type isoform X8

    UniProtKB/TrEMBL
    A0A8C5UKY8, A0A8C5VMG2
    Related
    ENSMICP00000023513.2, ENSMICT00000030588.2
    Conserved Domains (3) summary
    cl00055
    Location:60 → 162
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:205 → 494
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:1 → 38
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  6. XM_012790429.2 → XP_012645883.1  nuclear factor 1 X-type isoform X11

    See identical proteins and their annotated locations for XP_012645883.1

    UniProtKB/TrEMBL
    A0A8B7I4U1, A0A8C5UKY8
    Conserved Domains (3) summary
    pfam10524
    Location:2 → 38
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:205 → 410
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:60 → 162
    MH1; N-terminal Mad Homology 1 (MH1) domain

  7. XM_012790418.2 → XP_012645872.1  nuclear factor 1 X-type isoform X1

    UniProtKB/TrEMBL
    A0A8B7I6T3, A0A8C5VWR4
    Related
    ENSMICP00000032009.1, ENSMICT00000047929.2
    Conserved Domains (3) summary
    cl00055
    Location:123 → 225
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:268 → 557
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:65 → 101
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  8. XM_012790419.2 → XP_012645873.1  nuclear factor 1 X-type isoform X2

    UniProtKB/TrEMBL
    A0A8B7I4S9, A0A8C5VWR4
    Conserved Domains (3) summary
    cl00055
    Location:123 → 225
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:268 → 516
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:65 → 101
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  9. XM_012790427.2 → XP_012645881.1  nuclear factor 1 X-type isoform X9

    UniProtKB/TrEMBL
    A0A8B7I7Y9
    Conserved Domains (3) summary
    cl00055
    Location:123 → 225
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:268 → 432
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:65 → 101
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  10. XM_012790425.2 → XP_012645879.1  nuclear factor 1 X-type isoform X7

    UniProtKB/TrEMBL
    A0A8B7I4W6, A0A8C5VWR4
    Conserved Domains (3) summary
    cl00055
    Location:123 → 225
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:268 → 473
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:65 → 101
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  11. XM_012790420.2 → XP_012645874.1  nuclear factor 1 X-type isoform X3

    UniProtKB/TrEMBL
    A0A8B7I4W1, A0A8C5UKY8
    Conserved Domains (3) summary
    cl00055
    Location:76 → 178
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:221 → 510
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:18 → 54
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  12. XM_012790421.2 → XP_012645875.1  nuclear factor 1 X-type isoform X4

    UniProtKB/TrEMBL
    A0A8B7I4T2, A0A8C5UKY8
    Conserved Domains (3) summary
    cl00055
    Location:71 → 173
    MH1; N-terminal Mad Homology 1 (MH1) domain
    pfam00859
    Location:216 → 505
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:11 → 49
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  13. XM_012790430.2 → XP_012645884.1  nuclear factor 1 X-type isoform X12

    See identical proteins and their annotated locations for XP_012645884.1

    UniProtKB/TrEMBL
    A0A8B7I4X1, A0A8C5YCA4
    Conserved Domains (3) summary
    pfam10524
    Location:13 → 49
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:216 → 380
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:71 → 173
    MH1; N-terminal Mad Homology 1 (MH1) domain
Nucleotide Protein
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