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SSBP3 single stranded DNA binding protein 3 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105862968, updated on 13-Mar-2024

Summary

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Gene symbol
SSBP3
Gene description
single stranded DNA binding protein 3
See related
Ensembl:ENSMICG00000003921
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 2 NC_033661.1 (18266171..18423305)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012201752.1 (80571..240747, complement)

Chromosome 2 - NC_033661.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 151 member A Neighboring gene acyl-CoA thioesterase 11 Neighboring gene uncharacterized LOC105862965 Neighboring gene uncharacterized LOC105862969 Neighboring gene NADH-cytochrome b5 reductase-like Neighboring gene mitochondrial ribosomal protein L37

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
single-stranded DNA-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033661.1 Reference Mmur_3.0 Primary Assembly

    Range
    18266171..18423305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012749643.1 → XP_012605097.1  single-stranded DNA-binding protein 3 isoform X2

    See identical proteins and their annotated locations for XP_012605097.1

    UniProtKB/TrEMBL
    A0A8C5XS29
    Related
    ENSMICP00000040299.1, ENSMICT00000036427.2
    Conserved Domains (2) summary
    smart00667
    Location:17 → 43
    LisH; Lissencephaly type-1-like homology motif
    pfam04503
    Location:81 → 365
    SSDP; Single-stranded DNA binding protein, SSDP

  2. XM_012749646.1 → XP_012605100.1  single-stranded DNA-binding protein 3 isoform X4

    See identical proteins and their annotated locations for XP_012605100.1

    UniProtKB/TrEMBL
    A0A8C5VU79
    Related
    ENSMICP00000030420.2, ENSMICT00000028353.2
    Conserved Domains (2) summary
    smart00667
    Location:17 → 43
    LisH; Lissencephaly type-1-like homology motif
    pfam04503
    Location:81 → 338
    SSDP; Single-stranded DNA binding protein, SSDP

  3. XM_012749642.1 → XP_012605096.1  single-stranded DNA-binding protein 3 isoform X1

    See identical proteins and their annotated locations for XP_012605096.1

    UniProtKB/TrEMBL
    A0A8B7FAF9
    Conserved Domains (2) summary
    smart00667
    Location:17 → 43
    LisH; Lissencephaly type-1-like homology motif
    pfam04503
    Location:81 → 373
    SSDP; Single-stranded DNA binding protein, SSDP

  4. XM_012749644.1 → XP_012605098.1  single-stranded DNA-binding protein 3 isoform X3

    See identical proteins and their annotated locations for XP_012605098.1

    UniProtKB/TrEMBL
    A0A8B7FAH1
    Conserved Domains (2) summary
    smart00667
    Location:17 → 43
    LisH; Lissencephaly type-1-like homology motif
    pfam04503
    Location:81 → 346
    SSDP; Single-stranded DNA binding protein, SSDP
Nucleotide Protein
Heading Accession and Version

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