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TMTC1 transmembrane O-mannosyltransferase targeting cadherins 1 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105862026, updated on 13-Mar-2024

Summary

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Gene symbol
TMTC1
Gene description
transmembrane O-mannosyltransferase targeting cadherins 1
See related
Ensembl:ENSMICG00000013263
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See TMTC1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 21 NC_033680.1 (1347483..1644162)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012195531.1 (1027187..1323832, complement)

Chromosome 21 - NC_033680.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105862282 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene ovochymase 1 Neighboring gene ERGIC and golgi 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 1
Names
transmembrane and tetratricopeptide repeat containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033680.1 Reference Mmur_3.0 Primary Assembly

    Range
    1347483..1644162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012748003.2 → XP_012603457.2  transmembrane and TPR repeat-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B7F6S7, A0A8C5XRE4
    Related
    ENSMICP00000040899.1, ENSMICT00000064603.1
    Conserved Domains (3) summary
    sd00006
    Location:644 → 672
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:354 → 427
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:531 → 944
    TPR_11; TPR repeat

  2. XM_012748009.2 → XP_012603463.2  transmembrane and TPR repeat-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7F6M5, A0A8C5V027
    Conserved Domains (3) summary
    sd00006
    Location:575 → 603
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:285 → 358
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:462 → 875
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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