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MYOF myoferlin [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105822710, updated on 13-Mar-2024

Summary

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Gene symbol
MYOF
Gene description
myoferlin
See related
Ensembl:ENSPCOG00000005973
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
54
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012152285.1 (8347619..8497188, complement)

NW_012152285.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene cytochrome P450 family 26 subfamily A member 1 Neighboring gene centrosomal protein 55 Neighboring gene free fatty acid receptor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012152285.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myoferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012152285.1 Reference Pcoq_1.0 Primary Assembly

    Range
    8347619..8497188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012659733.1 → XP_012515187.1  myoferlin isoform X2

    UniProtKB/TrEMBL
    A0A2K6EJQ1
    Related
    ENSPCOP00000001947.1, ENSPCOT00000006788.1
    Conserved Domains (11) summary
    cd04011
    Location:196 → 305
    C2B_Ferlin; C2 domain second repeat in Ferlin
    cd04017
    Location:1126 → 1259
    C2D_Ferlin; C2 domain fourth repeat in Ferlin
    cd04018
    Location:359 → 522
    C2C_Ferlin; C2 domain third repeat in Ferlin
    cd04037
    Location:1541 → 1664
    C2E_Ferlin; C2 domain fifth repeat in Ferlin
    cd08373
    Location:5 → 136
    C2A_Ferlin; C2 domain first repeat in Ferlin
    cd08374
    Location:1777 → 1908
    C2F_Ferlin; C2 domain sixth repeat in Ferlin
    smart00693
    Location:914 → 970
    DysFN; Dysferlin domain, N-terminal region
    pfam08150
    Location:756 → 828
    FerB; FerB (NUC096) domain
    pfam08151
    Location:303 → 353
    FerI; FerI (NUC094) domain
    pfam08165
    Location:667 → 724
    FerA; FerA (NUC095) domain
    pfam16165
    Location:1924 → 2012
    Ferlin_C; Ferlin C-terminus

  2. XM_012659732.1 → XP_012515186.1  myoferlin isoform X1

    UniProtKB/TrEMBL
    A0A2K6EJP9
    Related
    ENSPCOP00000001942.1, ENSPCOT00000006769.1
    Conserved Domains (11) summary
    cd04011
    Location:196 → 305
    C2B_Ferlin; C2 domain second repeat in Ferlin
    cd04017
    Location:1139 → 1272
    C2D_Ferlin; C2 domain fourth repeat in Ferlin
    cd04018
    Location:359 → 535
    C2C_Ferlin; C2 domain third repeat in Ferlin
    cd04037
    Location:1554 → 1677
    C2E_Ferlin; C2 domain fifth repeat in Ferlin
    cd08373
    Location:5 → 136
    C2A_Ferlin; C2 domain first repeat in Ferlin
    cd08374
    Location:1790 → 1921
    C2F_Ferlin; C2 domain sixth repeat in Ferlin
    smart00693
    Location:927 → 983
    DysFN; Dysferlin domain, N-terminal region
    pfam08150
    Location:769 → 841
    FerB; FerB (NUC096) domain
    pfam08151
    Location:303 → 353
    FerI; FerI (NUC094) domain
    pfam08165
    Location:680 → 737
    FerA; FerA (NUC095) domain
    pfam16165
    Location:1937 → 2025
    Ferlin_C; Ferlin C-terminus
Nucleotide Protein
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