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PDLIM4 PDZ and LIM domain 4 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105821009, updated on 13-Mar-2024

Summary

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Gene symbol
PDLIM4
Gene description
PDZ and LIM domain 4
See related
Ensembl:ENSPCOG00000001850
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See PDLIM4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012151430.1 (315991..329527, complement)

NW_012151430.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 4 Neighboring gene uncharacterized protein C7orf73-like Neighboring gene prolyl 4-hydroxylase subunit alpha 2 Neighboring gene colony stimulating factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012151430.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables muscle alpha-actinin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of filamentous actin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PDZ and LIM domain protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012151430.1 Reference Pcoq_1.0 Primary Assembly

    Range
    315991..329527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012657617.1 → XP_012513071.1  PDZ and LIM domain protein 4

    UniProtKB/TrEMBL
    A0A2K6EFU4
    Related
    ENSPCOP00000000598.1, ENSPCOT00000002036.1
    Conserved Domains (2) summary
    cd00992
    Location:2 → 80
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam15936
    Location:151 → 225
    DUF4749; Domain of unknown function (DUF4749)
Nucleotide Protein
Heading Accession and Version

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