U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SORT1 sortilin 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105813755, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SORT1
Gene description
sortilin 1
See related
Ensembl:ENSPCOG00000015703
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012148496.1 (361939..432865)

NW_012148496.1Genomic Context describing neighboring genes Neighboring gene mesoderm induction early response protein 1 pseudogene Neighboring gene proteasome 20S subunit alpha 5 Neighboring gene myosin binding protein H like Neighboring gene proline and serine rich coiled-coil 1 Neighboring gene cadherin EGF LAG seven-pass G-type receptor 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012148496.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to endosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sortilin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012148496.1 Reference Pcoq_1.0 Primary Assembly

    Range
    361939..432865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012648536.1 → XP_012503990.1  sortilin isoform X2

    UniProtKB/TrEMBL
    A0A2K6F499
    Related
    ENSPCOP00000008793.1, ENSPCOT00000019350.1
    Conserved Domains (2) summary
    smart00602
    Location:133 → 741
    VPS10; VPS10 domain
    pfam15901
    Location:574 → 741
    Sortilin_C; Sortilin, neurotensin receptor 3, C-terminal

  2. XM_012648535.1 → XP_012503989.1  sortilin isoform X1

    Conserved Domains (2) summary
    smart00602
    Location:133 → 741
    VPS10; VPS10 domain
    pfam15901
    Location:574 → 741
    Sortilin_C; Sortilin, neurotensin receptor 3, C-terminal

  3. XM_012648537.1 → XP_012503991.1  sortilin isoform X3

    Conserved Domains (2) summary
    smart00602
    Location:1 → 604
    VPS10; VPS10 domain
    pfam15901
    Location:437 → 604
    Sortilin_C; Sortilin, neurotensin receptor 3, C-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.