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NR6A1 nuclear receptor subfamily 6 group A member 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105806540, updated on 13-Mar-2024

Summary

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Gene symbol
NR6A1
Gene description
nuclear receptor subfamily 6 group A member 1
See related
Ensembl:ENSPCOG00000027156
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012138525.1 (7759839..7985930)

NW_012138525.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 38 Neighboring gene olfactomedin like 2A Neighboring gene uncharacterized LOC105806541 Neighboring gene nuclear receptor subfamily 5 group A member 1 Neighboring gene adhesion G protein-coupled receptor D2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012138525.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 6 group A member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012138525.1 Reference Pcoq_1.0 Primary Assembly

    Range
    7759839..7985930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012639676.1 → XP_012495130.1  nuclear receptor subfamily 6 group A member 1 isoform X4

    See identical proteins and their annotated locations for XP_012495130.1

    UniProtKB/TrEMBL
    A0A2K6GRV9
    Conserved Domains (2) summary
    cd06953
    Location:251 → 462
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:48 → 137
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

  2. XM_012639675.1 → XP_012495129.1  nuclear receptor subfamily 6 group A member 1 isoform X3

    See identical proteins and their annotated locations for XP_012495129.1

    UniProtKB/TrEMBL
    A0A2K6GRV9
    Conserved Domains (2) summary
    cd06953
    Location:252 → 463
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:48 → 137
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

  3. XM_012639673.1 → XP_012495127.1  nuclear receptor subfamily 6 group A member 1 isoform X1

    See identical proteins and their annotated locations for XP_012495127.1

    UniProtKB/TrEMBL
    A0A2K6GRV8, A0A2K6GRV9
    Related
    ENSPCOP00000028967.1, ENSPCOT00000039902.1
    Conserved Domains (2) summary
    cd06953
    Location:256 → 467
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:52 → 141
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

  4. XM_012639674.1 → XP_012495128.1  nuclear receptor subfamily 6 group A member 1 isoform X2

    See identical proteins and their annotated locations for XP_012495128.1

    UniProtKB/TrEMBL
    A0A2K6GRV9
    Related
    ENSPCOP00000028968.1, ENSPCOT00000039903.1
    Conserved Domains (2) summary
    cd06953
    Location:255 → 466
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:52 → 141
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers
Nucleotide Protein
Heading Accession and Version

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