U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHD1 chromodomain helicase DNA binding protein 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105805848, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CHD1
Gene description
chromodomain helicase DNA binding protein 1
See related
Ensembl:ENSPCOG00000021354
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012137747.1 (4643923..4739174, complement)

NW_012137747.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L3 pseudogene Neighboring gene repulsive guidance molecule BMP co-receptor b Neighboring gene actin-related protein 10 pseudogene Neighboring gene nucleolin-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012137747.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chromodomain-helicase-DNA-binding protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012137747.1 Reference Pcoq_1.0 Primary Assembly

    Range
    4643923..4739174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012638799.1 → XP_012494253.1  chromodomain-helicase-DNA-binding protein 1

    UniProtKB/TrEMBL
    A0A2K6FY07
    Related
    ENSPCOP00000018869.1, ENSPCOT00000029514.1
    Conserved Domains (6) summary
    PHA03420
    Location:1122 → 1212
    PHA03420; E4 protein; Provisional
    smart00487
    Location:321 → 522
    DEXDc; DEAD-like helicases superfamily
    cd00024
    Location:154 → 203
    CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    cd00046
    Location:348 → 493
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00385
    Location:238 → 291
    Chromo; Chromo (CHRromatin Organization MOdifier) domain
    pfam08648
    Location:1087 → 1189
    DUF1777; Protein of unknown function (DUF1777)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.