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LOC105778602 zinc finger protein ZAT12 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105778602, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105778602
Gene description
zinc finger protein ZAT12
Locus tag
B456_011G254300
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 10 NC_068574.1 (57890366..57891134)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 11 NC_026939.1 (58326818..58327613)

Chromosome 10 - NC_068574.1Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene zinc finger protein ZAT12 Neighboring gene nucleolar GTP-binding protein 1-like Neighboring gene 21 kDa seed protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to chitin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZAT12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068574.1 Reference ASM2569854v1 Primary Assembly

    Range
    57890366..57891134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012602329.2 → XP_012457783.1  zinc finger protein ZAT12

    See identical proteins and their annotated locations for XP_012457783.1

    UniProtKB/TrEMBL
    A0A0D2TDJ3
    Conserved Domains (1) summary
    pfam13912
    Location:45 → 71
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
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