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LOC105778517 basic leucine zipper 61 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105778517, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105778517
Gene description
basic leucine zipper 61
Locus tag
B456_002G064900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 1 NC_068565.1 (5632228..5635138, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 2 NC_026930.1 (7612255..7615174, complement)

Chromosome 1 - NC_068565.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105778496 Neighboring gene sodium/calcium exchanger NCL Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene ras-related protein Rab11B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper 61

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068565.1 Reference ASM2569854v1 Primary Assembly

    Range
    5632228..5635138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012602246.2 → XP_012457700.1  basic leucine zipper 61

    See identical proteins and their annotated locations for XP_012457700.1

    UniProtKB/TrEMBL
    A0A0D2R1K8
    Conserved Domains (1) summary
    cd14703
    Location:191 → 241
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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