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LOC105778367 transcription factor FAMA [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105778367, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105778367
Gene description
transcription factor FAMA
Locus tag
B456_011G159100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 10 NC_068574.1 (28938975..28941187, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 11 NC_026939.1 (28779366..28781579, complement)

Chromosome 10 - NC_068574.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128033798 Neighboring gene uncharacterized LOC128033797 Neighboring gene putative lysine-specific demethylase JMJ16 Neighboring gene uncharacterized LOC105777211

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in guard cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stomatal complex development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor FAMA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068574.1 Reference ASM2569854v1 Primary Assembly

    Range
    28938975..28941187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012602053.2 → XP_012457507.2  transcription factor FAMA isoform X2

  2. XM_012602052.2 → XP_012457506.2  transcription factor FAMA isoform X1

Nucleotide Protein
Heading Accession and Version

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