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LOC105765286 ethylene-responsive transcription factor CRF1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105765286, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105765286
Gene description
ethylene-responsive transcription factor CRF1
Locus tag
B456_008G252300
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 12 NC_068576.1 (54225976..54227762)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 8 NC_026936.1 (53599955..53601745)

Chromosome 12 - NC_068576.1Genomic Context describing neighboring genes Neighboring gene constitutive photomorphogenesis protein 10-like Neighboring gene ubiquitin-conjugating enzyme E2-17 kDa Neighboring gene arabinogalactan protein 41 Neighboring gene uncharacterized LOC105765288

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor CRF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068576.1 Reference ASM2569854v1 Primary Assembly

    Range
    54225976..54227762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012584298.2 → XP_012439752.1  ethylene-responsive transcription factor CRF1

    See identical proteins and their annotated locations for XP_012439752.1

    UniProtKB/TrEMBL
    A0A0D2T6R3, A0A7J8PWJ7
    Conserved Domains (1) summary
    smart00380
    Location:127 → 184
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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