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SOX11 SRY-box transcription factor 11 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105709669, updated on 6-Jun-2024

Summary

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Gene symbol
SOX11
Gene description
SRY-box transcription factor 11
See related
Ensembl:ENSANAG00000019575
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988471.1 (4984270..4985755)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018509326.1 (5602695..5604180)

NW_026988471.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA31 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC110567524 Neighboring gene uncharacterized LOC105709832

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor SOX-11
Names
SRY-box 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988471.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    4984270..4985755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021667242.2 → XP_021522917.2  transcription factor SOX-11

    UniProtKB/TrEMBL
    A0A2K5C3J1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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