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TBC1D1 TBC1 domain family member 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105584867, updated on 13-Mar-2024

Summary

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Gene symbol
TBC1D1
Gene description
TBC1 domain family member 1
See related
Ensembl:ENSCATG00000008268
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012008694.1 (6083116..6336153, complement)

NW_012008694.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105584864 Neighboring gene uncharacterized LOC105584865 Neighboring gene 28S ribosomal protein S33, mitochondrial pseudogene Neighboring gene proteasome activator complex subunit 2 pseudogene Neighboring gene pituitary tumor-transforming 2 Neighboring gene neuronal regeneration-related protein pseudogene Neighboring gene phosphoglucomutase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012008694.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
TBC1 domain family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012008694.1 Reference Caty_1.0

    Range
    6083116..6336153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012057975.1 → XP_011913365.1  TBC1 domain family member 1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5KMI2
    Conserved Domains (4) summary
    smart00164
    Location:762 → 979
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd01269
    Location:35 → 242
    PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
    pfam09786
    Location:414 → 709
    CytochromB561_N; Cytochrome B561, N terminal
    pfam11830
    Location:660 → 710
    DUF3350; Domain of unknown function (DUF3350)

  2. XM_012057974.1 → XP_011913364.1  TBC1 domain family member 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5KMI2, A0A2K5KMI8
    Related
    ENSCATP00000001904.1, ENSCATT00000009591.1
    Conserved Domains (4) summary
    smart00164
    Location:797 → 1014
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd01269
    Location:164 → 371
    PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
    pfam11830
    Location:695 → 745
    DUF3350; Domain of unknown function (DUF3350)
    cl17171
    Location:16 → 150
    PH-like; Pleckstrin homology-like domain

  3. XM_012057973.1 → XP_011913363.1  TBC1 domain family member 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5KMI2
    Conserved Domains (4) summary
    smart00164
    Location:837 → 1054
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd01269
    Location:164 → 371
    PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
    pfam11830
    Location:735 → 785
    DUF3350; Domain of unknown function (DUF3350)
    cl17171
    Location:16 → 150
    PH-like; Pleckstrin homology-like domain

  4. XM_012057972.1 → XP_011913362.1  TBC1 domain family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5KMI1, A0A2K5KMI2
    Related
    ENSCATP00000001900.1, ENSCATT00000009550.1
    Conserved Domains (5) summary
    smart00164
    Location:891 → 1108
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd01269
    Location:164 → 371
    PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
    pfam09786
    Location:543 → 838
    CytochromB561_N; Cytochrome B561, N terminal
    pfam11830
    Location:789 → 839
    DUF3350; Domain of unknown function (DUF3350)
    cl17171
    Location:16 → 150
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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