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GGPS1 geranylgeranyl diphosphate synthase 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105574886, updated on 13-Mar-2024

Summary

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Gene symbol
GGPS1
Gene description
geranylgeranyl diphosphate synthase 1
See related
Ensembl:ENSCATG00000042363
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See GGPS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012003946.1 (6653662..6668182)

NW_012003946.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 34 Neighboring gene AT-rich interaction domain 4B Neighboring gene tubulin folding cofactor E Neighboring gene beta-1,3-N-acetylgalactosaminyltransferase 2 Neighboring gene uncharacterized LOC105574891

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012003946.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prenyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
geranylgeranyl pyrophosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012003946.1 Reference Caty_1.0

    Range
    6653662..6668182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012036191.1 → XP_011891581.1  geranylgeranyl pyrophosphate synthase

    See identical proteins and their annotated locations for XP_011891581.1

    UniProtKB/TrEMBL
    A0A2K5NQB5
    Conserved Domains (1) summary
    pfam00348
    Location:9 → 251
    polyprenyl_synt; Polyprenyl synthetase

  2. XM_012036192.1 → XP_011891582.1  geranylgeranyl pyrophosphate synthase

    See identical proteins and their annotated locations for XP_011891582.1

    UniProtKB/TrEMBL
    A0A2K5NQB5
    Related
    ENSCATP00000039506.1, ENSCATT00000063819.1
    Conserved Domains (1) summary
    pfam00348
    Location:9 → 251
    polyprenyl_synt; Polyprenyl synthetase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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