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CRY1 cryptochrome circadian regulator 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105573254, updated on 13-Mar-2024

Summary

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Gene symbol
CRY1
Gene description
cryptochrome circadian regulator 1
See related
Ensembl:ENSCATG00000036896
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012003393.1 (6402907..6507102)

NW_012003393.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA-like Neighboring gene uncharacterized LOC105573252 Neighboring gene keratin, type II cytoskeletal 8 pseudogene Neighboring gene transmembrane protein 263 Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene elongation factor 1-delta-like Neighboring gene RIC8 guanine nucleotide exchange factor B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012003393.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cryptochrome-1
Names
cryptochrome circadian clock 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012003393.1 Reference Caty_1.0

    Range
    6402907..6507102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012032559.1 → XP_011887949.1  cryptochrome-1

    See identical proteins and their annotated locations for XP_011887949.1

    UniProtKB/TrEMBL
    A0A2K5MP50
    Related
    ENSCATP00000027012.1, ENSCATT00000051254.1
    Conserved Domains (2) summary
    COG0415
    Location:6 → 491
    PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
    pfam03441
    Location:288 → 486
    FAD_binding_7; FAD binding domain of DNA photolyase

  2. XM_012032560.1 → XP_011887950.1  cryptochrome-1

    See identical proteins and their annotated locations for XP_011887950.1

    UniProtKB/TrEMBL
    A0A2K5MP50
    Conserved Domains (2) summary
    COG0415
    Location:6 → 491
    PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
    pfam03441
    Location:288 → 486
    FAD_binding_7; FAD binding domain of DNA photolyase
Nucleotide Protein
Heading Accession and Version

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