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SLC13A5 solute carrier family 13 member 5 [ Colobus angolensis palliatus ]

Gene ID: 105523569, updated on 13-Mar-2024

Summary

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Gene symbol
SLC13A5
Gene description
solute carrier family 13 member 5
See related
Ensembl:ENSCANG00000036631
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012118154.1 (2633827..2662697, complement)

NW_012118154.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown open reading frame, human C17orf100 Neighboring gene allene oxide synthase-lipoxygenase protein-like Neighboring gene mediator complex subunit 31 Neighboring gene XIAP associated factor 1 Neighboring gene F-box protein 39

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012118154.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables citrate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:dicarboxylate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in citrate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic anion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 13 member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012118154.1 Reference Cang.pa_1.0

    Range
    2633827..2662697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011958440.1 → XP_011813830.1  solute carrier family 13 member 5 isoform X2

    Conserved Domains (2) summary
    TIGR00785
    Location:41 → 530
    dass; anion transporter
    cl21473
    Location:31 → 535
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

  2. XM_011958443.1 → XP_011813833.1  solute carrier family 13 member 5 isoform X4

    UniProtKB/TrEMBL
    A0A2K5JCB5
    Related
    ENSCANP00000026430.1, ENSCANT00000049440.1
    Conserved Domains (2) summary
    COG0471
    Location:31 → 497
    CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
    cl21473
    Location:31 → 482
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

  3. XM_011958439.1 → XP_011813829.1  solute carrier family 13 member 5 isoform X1

    UniProtKB/TrEMBL
    A0A2K5JCA3
    Related
    ENSCANP00000026422.1, ENSCANT00000049431.1
    Conserved Domains (2) summary
    COG0471
    Location:31 → 547
    CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
    cl21473
    Location:31 → 552
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

  4. XM_011958441.1 → XP_011813831.1  solute carrier family 13 member 5 isoform X3

    UniProtKB/TrEMBL
    A0A2K5JC08
    Related
    ENSCANP00000026433.1, ENSCANT00000049443.1
    Conserved Domains (2) summary
    COG0471
    Location:45 → 504
    CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
    cl21473
    Location:35 → 509
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
Nucleotide Protein
Heading Accession and Version

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