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DSC3 desmocollin 3 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105468134, updated on 13-Mar-2024

Summary

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Gene symbol
DSC3
Gene description
desmocollin 3
See related
Ensembl:ENSMNEG00000015769
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See DSC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012010667.1 (818316..870361)

NW_012010667.1Genomic Context describing neighboring genes Neighboring gene desmocollin 1 Neighboring gene small nucleolar RNA U13 Neighboring gene desmocollin 2 Neighboring gene U6 spliceosomal RNA Neighboring gene leucine-rich repeat-containing protein 37A3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012010667 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gamma-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in desmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
desmocollin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012010667.1 Reference Mnem_1.0

    Range
    818316..870361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011718185.2 → XP_011716487.1  desmocollin-3 isoform X3

    UniProtKB/TrEMBL
    A0A2K6AW69, A0A2K6AW76
    Related
    ENSMNEP00000003414.1, ENSMNET00000017262.1
    Conserved Domains (5) summary
    cd11304
    Location:247 → 357
    Cadherin_repeat; Cadherin tandem repeat domain
    smart01055
    Location:28 → 111
    Cadherin_pro; Cadherin prodomain like
    pfam00028
    Location:140 → 234
    Cadherin; Cadherin domain
    pfam01049
    Location:722 → 784
    Cadherin_C; Cadherin cytoplasmic region
    cl09101
    Location:489 → 562
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  2. XM_011718176.2 → XP_011716478.1  desmocollin-3 isoform X2

    UniProtKB/TrEMBL
    A0A2K6AW69, A0A2K6AW80
    Related
    ENSMNEP00000003419.1, ENSMNET00000017278.1
    Conserved Domains (4) summary
    cd11304
    Location:247 → 351
    Cadherin_repeat; Cadherin tandem repeat domain
    smart01055
    Location:28 → 111
    Cadherin_pro; Cadherin prodomain like
    pfam00028
    Location:140 → 234
    Cadherin; Cadherin domain
    cl09101
    Location:596 → 669
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  3. XM_011718168.2 → XP_011716470.1  desmocollin-3 isoform X1

    UniProtKB/TrEMBL
    A0A2K6AW69, A0A2K6AW92
    Related
    ENSMNEP00000003412.1, ENSMNET00000017244.1
    Conserved Domains (5) summary
    cd11304
    Location:247 → 351
    Cadherin_repeat; Cadherin tandem repeat domain
    smart01055
    Location:28 → 111
    Cadherin_pro; Cadherin prodomain like
    pfam00028
    Location:140 → 234
    Cadherin; Cadherin domain
    pfam01049
    Location:829 → 891
    Cadherin_C; Cadherin cytoplasmic region
    cl09101
    Location:596 → 669
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
Nucleotide Protein
Heading Accession and Version

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