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AFTPH aftiphilin [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105465146, updated on 13-Mar-2024

Summary

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Gene symbol
AFTPH
Gene description
aftiphilin
See related
Ensembl:ENSMNEG00000040816
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012012799.1 (33000280..33070541)

NW_012012799.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112423714 Neighboring gene uncharacterized LOC105465143 Neighboring gene galectin like Neighboring gene acrosin Neighboring gene U6 spliceosomal RNA Neighboring gene SERTA domain containing 2 Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene uncharacterized LOC105465149

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012012799 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-1 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aftiphilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012012799.1 Reference Mnem_1.0

    Range
    33000280..33070541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011713411.1 → XP_011711713.1  aftiphilin isoform X1

    See identical proteins and their annotated locations for XP_011711713.1

    UniProtKB/TrEMBL
    A0A2K6DHG6
    Related
    ENSMNEP00000035336.1, ENSMNET00000059793.1
    Conserved Domains (1) summary
    pfam15045
    Location:700 → 768
    Clathrin_bdg; Clathrin-binding box of Aftiphilin, vesicle trafficking

  2. XM_011713412.1 → XP_011711714.1  aftiphilin isoform X2

    See identical proteins and their annotated locations for XP_011711714.1

    UniProtKB/TrEMBL
    A0A2K6DHF5
    Related
    ENSMNEP00000035338.1, ENSMNET00000059795.1
    Conserved Domains (1) summary
    pfam15045
    Location:700 → 768
    Clathrin_bdg; Clathrin-binding box of Aftiphilin, vesicle trafficking

RNA

  1. XR_977328.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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