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LOC105374510 uncharacterized LOC105374510 [ Homo sapiens (human) ]

Gene ID: 105374510, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105374510
Gene description
uncharacterized LOC105374510
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
4p15.31
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (18411801..18839964)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (18400590..18872231)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986220 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:18160933-18161439 Neighboring gene uncharacterized LOC107986262 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21359 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:18631748-18632248 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:18693291-18694224 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21360 Neighboring gene uncharacterized LOC107986263 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21361 Neighboring gene NANOG hESC enhancer GRCh37_chr4:19012316-19012830 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:19085315-19085875 Neighboring gene RNA, 5S ribosomal pseudogene 157

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    18411801..18839964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001741602.2 RNA Sequence

  2. XR_001741601.2 RNA Sequence

  3. XR_925445.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    18400590..18872231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074514.1 RNA Sequence

  2. XR_007074513.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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