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PGTG_04902 translation initiation factor eIF-5 [ Puccinia graminis f. sp. tritici CRL 75-36-700-3 ]

Gene ID: 10537134, updated on 17-May-2024

Summary

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Gene symbol
PGTG_04902
Gene description
translation initiation factor eIF-5
Primary source
FungiDB:PGTG_04902
Locus tag
PGTG_04902
See related
VEuPathDB:PGTG_04902
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Puccinia graminis f. sp. tritici CRL 75-36-700-3 (strain: CRL 75-36-700-3, forma-specialis: tritici CRL 75-36-700-3)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia
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Genomic context

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See PGTG_04902 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_003526558.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ketol-acid reductoisomerase, mitochondrial Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526558.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-dissociation inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables eukaryotic initiation factor eIF2 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in formation of cytoplasmic translation initiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in formation of translation preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translation initiation factor eIF-5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526558.1 Reference assembly

    Range
    1131751..1133267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003323317.1 → XP_003323365.1  translation initiation factor eIF-5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]

    See identical proteins and their annotated locations for XP_003323365.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B0RZ45, A0A5B0S9D3, E3K389
    Conserved Domains (2) summary
    cd11561
    Location:246 → 393
    W2_eIF5; C-terminal W2 domain of eukaryotic translation initiation factor 5
    pfam01873
    Location:14 → 132
    eIF-5_eIF-2B; Domain found in IF2B/IF5
Nucleotide Protein
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