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IRX6 iroquois homeobox 6 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105292077, updated on 30-Mar-2024

Summary

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Gene symbol
IRX6
Gene description
iroquois homeobox 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See IRX6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888832.1 (1808335..1813686, complement)

NW_011888832.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene matrix metallopeptidase 2 Neighboring gene uncharacterized LOC105292048 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888832 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
iroquois-class homeodomain protein IRX-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888832.1 Reference Pvam_2.0

    Range
    1808335..1813686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011360179.2 → XP_011358481.2  iroquois-class homeodomain protein IRX-6

    UniProtKB/TrEMBL
    A0A6P3Q5M5
    Conserved Domains (2) summary
    pfam05920
    Location:164 → 203
    Homeobox_KN; Homeobox KN domain
    cl27820
    Location:145 → 230
    Abdominal-A; Homeobox protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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