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TMEM50A transmembrane protein 50A [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105290472, updated on 30-Mar-2024

Summary

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Gene symbol
TMEM50A
Gene description
transmembrane protein 50A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888817.1 (4376013..4390996)

NW_011888817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105290675 Neighboring gene arginine and serine rich protein 1 Neighboring gene 5S ribosomal RNA Neighboring gene Rh blood group CcEe antigens

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888817 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 50A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888817.1 Reference Pvam_2.0

    Range
    4376013..4390996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023529176.1 → XP_023384944.1  transmembrane protein 50A isoform X3

    UniProtKB/TrEMBL
    A0A6P6CC20
    Conserved Domains (1) summary
    pfam05255
    Location:9 → 126
    UPF0220; Uncharacterized protein family (UPF0220)

  2. XM_011357623.2 → XP_011355925.1  transmembrane protein 50A isoform X2

    UniProtKB/TrEMBL
    A0A6P3Q0J4
    Conserved Domains (1) summary
    pfam05255
    Location:9 → 156
    UPF0220; Uncharacterized protein family (UPF0220)

  3. XM_023529175.1 → XP_023384943.1  transmembrane protein 50A isoform X1

    UniProtKB/TrEMBL
    A0A6P6CC93
    Conserved Domains (1) summary
    pfam05255
    Location:9 → 158
    UPF0220; Uncharacterized protein family (UPF0220)
Nucleotide Protein
Heading Accession and Version

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