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Sp1 transcription factor Sp8 [ Bactrocera dorsalis (oriental fruit fly) ]

Gene ID: 105233308, updated on 7-Jul-2024

Summary

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Gene symbol
Sp1
Gene description
transcription factor Sp8
See related
EnsemblRapid:LOC105233308
Gene type
protein coding
RefSeq status
MODEL
Organism
Bactrocera dorsalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera
Also known as
Sp9
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM2337382v1 (GCF_023373825.1) 4 NC_064306.1 (40074964..40150871, complement)
102 previous assembly ASM78921v2 (GCF_000789215.1) Unplaced Scaffold NW_011876135.1 (18397..100432, complement)

Chromosome 4 - NC_064306.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105233153 Neighboring gene obg-like ATPase 1 Neighboring gene dynein heavy chain 2, axonemal kl-2 Neighboring gene transcription factor btd

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA sequencing to characterize transcriptional changes of sexual maturation and mating in the female oriental fruit fly Bactrocera dorsalis. Zheng W, et al. BMC Genomics, 2016 Mar 5. PMID 26946038, Free PMC Article
  2. Characterizing the developmental transcriptome of the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae) through comparative genomic analysis with Drosophila melanogaster utilizing modENCODE datasets. Geib SM, et al. BMC Genomics, 2014 Oct 28. PMID 25348373, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Sp9
Names
Sp9 transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bactrocera dorsalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2337382v1 Primary Assembly

Genomic

  1. NC_064306.1 Reference ASM2337382v1 Primary Assembly

    Range
    40074964..40150871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011215348.4 → XP_011213650.2  transcription factor Sp9 isoform X1

    UniProtKB/TrEMBL
    A0A6I9W991
    Related
    XP_011213650.2, XM_011215348.4

  2. XM_011215349.4 → XP_011213651.2  transcription factor Sp9 isoform X2

    UniProtKB/TrEMBL
    A0A6I9VJ25
    Related
    XP_011213651.2, XM_011215349.4

  3. XM_049454476.1 → XP_049310433.1  transcription factor Sp9 isoform X3

    UniProtKB/TrEMBL
    A0A6I9W991
    Related
    XP_049310433.1, XM_049454476.1

  4. XM_049454477.1 → XP_049310434.1  transcription factor Sp9 isoform X3

    UniProtKB/TrEMBL
    A0A6I9W991
    Related
    XP_049310434.1, XM_049454477.1
Nucleotide Protein
Heading Accession and Version

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