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SYNE3 spectrin repeat containing nuclear envelope family member 3 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105095538, updated on 6-Jun-2024

Summary

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Gene symbol
SYNE3
Gene description
spectrin repeat containing nuclear envelope family member 3
Locus tag
Cadr_000006417
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Also known as
Nesprin-3
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 5 NC_087440.1 (85894615..85984735, complement)
101 previous assembly CamDro3 (GCF_000803125.2) 6 NC_044516.1 (88840415..88930561, complement)

Chromosome 5 - NC_087440.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene calmin Neighboring gene uncharacterized LOC135321341 Neighboring gene uncharacterized LOC135321340 Neighboring gene small Cajal body-specific RNA 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of meiotic nuclear membrane microtubule tethering complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nesprin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087440.1 Reference mCamDro1.pat

    Range
    85894615..85984735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031454269.2 → XP_031310129.1  nesprin-3 isoform X1

    UniProtKB/TrEMBL
    A0A5N4E2K5
    Conserved Domains (3) summary
    TIGR02168
    Location:300 → 645
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:9 → 750
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    pfam10541
    Location:945 → 974
    KASH; Nuclear envelope localization domain

  2. XM_064486229.1 → XP_064342299.1  nesprin-3 isoform X2

    UniProtKB/TrEMBL
    A0A5N4E2K5
Nucleotide Protein
Heading Accession and Version

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