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C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105088713, updated on 19-Apr-2024

Summary

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Gene symbol
C1GALT1
Gene description
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Locus tag
Cadr_000007990
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 7 NC_087442.1 (58373496..58411384, complement)
101 previous assembly CamDro3 (GCF_000803125.2) 7 NC_044517.1 (26889394..26927868)

Chromosome 7 - NC_087442.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135321694 Neighboring gene meiosis regulator for oocyte development Neighboring gene collagen type XXVIII alpha 1 chain Neighboring gene protein S100-A10-like Neighboring gene uncharacterized LOC135321753 Neighboring gene asparagine synthetase (glutamine-hydrolyzing)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Names
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087442.1 Reference mCamDro1.pat

    Range
    58373496..58411384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010979626.3 → XP_010977928.2  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

  2. XM_031454941.2 → XP_031310801.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A5N4DYK6
    Conserved Domains (1) summary
    cl21608
    Location:107 → 248
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_004137779.2 RNA Sequence

  2. XR_837106.3 RNA Sequence

Nucleotide Protein
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