U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105074054 mutS protein homolog 5 [ Camelus bactrianus (Bactrian camel) ]

Gene ID: 105074054, updated on 20-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105074054
Gene description
mutS protein homolog 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus bactrianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Also known as
MSH5; SAPCD1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
102 current Ca_bactrianus_MBC_1.0 (GCF_000767855.1) Unplaced Scaffold NW_011515227.1 (338432..355053, complement)

NW_011515227.1Genomic Context describing neighboring genes Neighboring gene LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene valyl-tRNA synthetase 1 Neighboring gene von Willebrand factor A domain containing 7 Neighboring gene chloride intracellular channel 1 Neighboring gene DDAH family member 2, ADMA-independent

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_011515227 Unplaced Scaffold Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mismatched DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chiasma assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA mismatch repair protein MutS; mutS protein homolog 5
Names
mutS homolog 5
suppressor APC domain containing 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Camelus bactrianus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Genomic

  1. NW_011515227.1 Reference Ca_bactrianus_MBC_1.0 Primary Assembly

    Range
    338432..355053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045521577.1 → XP_045377533.1  mutS protein homolog 5 isoform X1

    UniProtKB/TrEMBL
    A0A9W3GEL8
    Conserved Domains (3) summary
    cd03281
    Location:563 → 769
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:126 → 807
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam11414
    Location:840 → 919
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

  2. XM_045521579.1 → XP_045377535.1  mutS protein homolog 5 isoform X2

    UniProtKB/TrEMBL
    A0A9W3GEI8
    Conserved Domains (3) summary
    cd03281
    Location:554 → 760
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:126 → 798
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam11414
    Location:831 → 910
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

  3. XM_045521581.1 → XP_045377537.1  mutS protein homolog 5 isoform X4

    UniProtKB/TrEMBL
    A0A9W3GEM9
    Conserved Domains (3) summary
    cd03281
    Location:536 → 742
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:126 → 780
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam11414
    Location:813 → 892
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

  4. XM_045521580.1 → XP_045377536.1  mutS protein homolog 5 isoform X3

    UniProtKB/TrEMBL
    A0A9W3GEL4
    Conserved Domains (3) summary
    COG0249
    Location:126 → 782
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam11414
    Location:815 → 894
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
    cl38936
    Location:563 → 744
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  5. XM_045521576.1 → XP_045377532.1  mutS protein homolog 5 isoform X1

    UniProtKB/TrEMBL
    A0A9W3GEL8
    Conserved Domains (3) summary
    cd03281
    Location:563 → 769
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:126 → 807
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam11414
    Location:840 → 919
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

  6. XM_045521582.1 → XP_045377538.1  mutS protein homolog 5 isoform X5

    UniProtKB/TrEMBL
    A0A9W3HMR5
    Conserved Domains (3) summary
    cd03281
    Location:491 → 697
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:54 → 735
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam11414
    Location:768 → 847
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

  7. XM_045521586.1 → XP_045377542.1  mutS protein homolog 5 isoform X9

    UniProtKB/TrEMBL
    A0A9W3GFK7
    Conserved Domains (3) summary
    cd03281
    Location:256 → 462
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:3 → 500
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam11414
    Location:533 → 612
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

  8. XM_045521587.1 → XP_045377543.1  mutS protein homolog 5 isoform X10

    UniProtKB/TrEMBL
    A0A9W3GF95
    Conserved Domains (3) summary
    cd03281
    Location:147 → 353
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    pfam11414
    Location:424 → 503
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
    cl29279
    Location:3 → 159
    MutS_III; MutS domain III

  9. XM_045521588.1 → XP_045377544.1  DNA mismatch repair protein MutS isoform X11

    UniProtKB/TrEMBL
    A0A9W3GEP9
    Conserved Domains (2) summary
    pfam11414
    Location:186 → 265
    Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein
    cl38936
    Location:1 → 115
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  10. XM_045521583.1 → XP_045377539.1  mutS protein homolog 5 isoform X6

    UniProtKB/TrEMBL
    A0A9W3HMQ0
    Conserved Domains (2) summary
    cd03281
    Location:563 → 769
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:126 → 807
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]

  11. XM_045521585.1 → XP_045377541.1  mutS protein homolog 5 isoform X8

    UniProtKB/TrEMBL
    A0A9W3GEP0
    Conserved Domains (2) summary
    cd03281
    Location:554 → 760
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:126 → 810
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]

  12. XM_045521584.1 → XP_045377540.1  mutS protein homolog 5 isoform X7

    UniProtKB/TrEMBL
    A0A9W3GEP2
    Conserved Domains (2) summary
    cd03281
    Location:563 → 769
    ABC_MSH5_euk; ATP-binding cassette domain of eukaryotic MutS5 homolog
    COG0249
    Location:126 → 819
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.