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MSR1 macrophage scavenger receptor 1 [ Camelus bactrianus (Bactrian camel) ]

Gene ID: 105067649, updated on 13-Mar-2024

Summary

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Gene symbol
MSR1
Gene description
macrophage scavenger receptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus bactrianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See MSR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Ca_bactrianus_MBC_1.0 (GCF_000767855.1) Unplaced Scaffold NW_011513270.1 (6155541..6221833, complement)

NW_011513270.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA-binding protein-like Neighboring gene tumor suppressor candidate 3 Neighboring gene uncharacterized LOC123616353 Neighboring gene uncharacterized LOC123616355

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011513270 Unplaced Scaffold Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
macrophage scavenger receptor types I and II

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus bactrianus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Genomic

  1. NW_011513270.1 Reference Ca_bactrianus_MBC_1.0 Primary Assembly

    Range
    6155541..6221833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045515448.1 → XP_045371404.1  macrophage scavenger receptor types I and II isoform X2

    UniProtKB/TrEMBL
    A0A9W3HGV2
    Conserved Domains (3) summary
    smart00202
    Location:350 → 450
    SR; Scavenger receptor Cys-rich
    pfam01391
    Location:280 → 334
    Collagen; Collagen triple helix repeat (20 copies)
    pfam03523
    Location:121 → 169
    Macscav_rec; Macrophage scavenger receptor

  2. XM_010953251.2 → XP_010951553.1  macrophage scavenger receptor types I and II isoform X2

    See identical proteins and their annotated locations for XP_010951553.1

    UniProtKB/TrEMBL
    A0A9W3HGV2
    Conserved Domains (3) summary
    smart00202
    Location:350 → 450
    SR; Scavenger receptor Cys-rich
    pfam01391
    Location:280 → 334
    Collagen; Collagen triple helix repeat (20 copies)
    pfam03523
    Location:121 → 169
    Macscav_rec; Macrophage scavenger receptor

  3. XM_010953252.2 → XP_010951554.1  macrophage scavenger receptor types I and II isoform X2

    See identical proteins and their annotated locations for XP_010951554.1

    UniProtKB/TrEMBL
    A0A9W3HGV2
    Conserved Domains (3) summary
    smart00202
    Location:350 → 450
    SR; Scavenger receptor Cys-rich
    pfam01391
    Location:280 → 334
    Collagen; Collagen triple helix repeat (20 copies)
    pfam03523
    Location:121 → 169
    Macscav_rec; Macrophage scavenger receptor

  4. XM_045515447.1 → XP_045371403.1  macrophage scavenger receptor types I and II isoform X1

    UniProtKB/TrEMBL
    A0A9W3HGU8
    Conserved Domains (3) summary
    smart00202
    Location:364 → 464
    SR; Scavenger receptor Cys-rich
    pfam01391
    Location:294 → 348
    Collagen; Collagen triple helix repeat (20 copies)
    pfam03523
    Location:135 → 183
    Macscav_rec; Macrophage scavenger receptor

  5. XM_010953253.2 → XP_010951555.1  macrophage scavenger receptor types I and II isoform X2

    See identical proteins and their annotated locations for XP_010951555.1

    UniProtKB/TrEMBL
    A0A9W3HGV2
    Conserved Domains (3) summary
    smart00202
    Location:350 → 450
    SR; Scavenger receptor Cys-rich
    pfam01391
    Location:280 → 334
    Collagen; Collagen triple helix repeat (20 copies)
    pfam03523
    Location:121 → 169
    Macscav_rec; Macrophage scavenger receptor

  6. XM_045515449.1 → XP_045371405.1  macrophage scavenger receptor types I and II isoform X3

    UniProtKB/TrEMBL
    A0A9W3G2Z6
    Conserved Domains (2) summary
    pfam01391
    Location:294 → 348
    Collagen; Collagen triple helix repeat (20 copies)
    pfam03523
    Location:135 → 183
    Macscav_rec; Macrophage scavenger receptor
Nucleotide Protein
Heading Accession and Version

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