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RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase [ Camelus bactrianus (Bactrian camel) ]

Gene ID: 105066488, updated on 13-Mar-2024

Summary

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Gene symbol
RFFL
Gene description
ring finger and FYVE like domain containing E3 ubiquitin protein ligase
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus bactrianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ca_bactrianus_MBC_1.0 (GCF_000767855.1) Unplaced Scaffold NW_011512843.1 (2438..63460, complement)

NW_011512843.1Genomic Context describing neighboring genes Neighboring gene ferritin light chain-like Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene DNA repair protein RAD51 homolog 4 Neighboring gene fibronectin type III domain containing 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011512843 Unplaced Scaffold Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway via death domain receptors IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K48-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase rififylin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus bactrianus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Genomic

  1. NW_011512843.1 Reference Ca_bactrianus_MBC_1.0 Primary Assembly

    Range
    2438..63460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045514321.1 → XP_045370277.1  E3 ubiquitin-protein ligase rififylin isoform X4

    UniProtKB/TrEMBL
    A0A9W3HFR9
    Conserved Domains (2) summary
    cd15770
    Location:44 → 92
    FYVE_CARP2; FYVE-like domain found in caspase regulator CARP2 and similar proteins
    cd16500
    Location:311 → 349
    RING-HC_CARP; RING finger, HC subclass, found in caspases-8 and -10-associated RING finger protein CARP-1, CARP-2 and similar proteins

  2. XM_045514320.1 → XP_045370276.1  E3 ubiquitin-protein ligase rififylin isoform X3

    UniProtKB/TrEMBL
    A0A9W3G0S2

  3. XM_045514319.1 → XP_045370275.1  E3 ubiquitin-protein ligase rififylin isoform X2

    UniProtKB/TrEMBL
    A0A9W3G0U2

  4. XM_010951841.2 → XP_010950143.2  E3 ubiquitin-protein ligase rififylin isoform X1

    UniProtKB/TrEMBL
    A0A9W3EKL8

  5. XM_045514322.1 → XP_045370278.1  E3 ubiquitin-protein ligase rififylin isoform X4

    UniProtKB/TrEMBL
    A0A9W3HFR9
    Conserved Domains (2) summary
    cd15770
    Location:44 → 92
    FYVE_CARP2; FYVE-like domain found in caspase regulator CARP2 and similar proteins
    cd16500
    Location:311 → 349
    RING-HC_CARP; RING finger, HC subclass, found in caspases-8 and -10-associated RING finger protein CARP-1, CARP-2 and similar proteins
Nucleotide Protein
Heading Accession and Version

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