U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hmg20a high mobility group 20A [ Esox lucius (northern pike) ]

Gene ID: 105029622, updated on 18-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
hmg20a
Gene description
high mobility group 20A
See related
Ensembl:ENSELUG00000001146
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 19
Exon count:
10
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 19 NC_047587.1 (41928565..41956936)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG19 NC_025986.4 (42274030..42302228)

Chromosome 19 - NC_047587.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117593424 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene pseudopodium-enriched atypical kinase 1 Neighboring gene synaptotagmin XII

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
high mobility group protein 20A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047587.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    41928565..41956936
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020040178.2 → XP_019895737.2  high mobility group protein 20A isoform X1

    UniProtKB/TrEMBL
    A0A3P8Z7P1
    Related
    ENSELUP00000024493.2, ENSELUT00000035948.3
    Conserved Domains (1) summary
    cd01390
    Location:44 → 109
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

  2. XM_034288418.1 → XP_034144309.1  high mobility group protein 20A isoform X3

    UniProtKB/TrEMBL
    A0A3P8Z6Z3
    Related
    ENSELUP00000024490.2, ENSELUT00000035945.3
    Conserved Domains (1) summary
    cd01390
    Location:44 → 109
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

  3. XM_034288417.1 → XP_034144308.1  high mobility group protein 20A isoform X2

    UniProtKB/TrEMBL
    A0A3P8Z7P1
    Conserved Domains (1) summary
    cd01390
    Location:44 → 109
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

RNA

  1. XR_004574816.1 RNA Sequence

  2. XR_004574817.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.