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glrbb glycine receptor, beta b [ Esox lucius (northern pike) ]

Gene ID: 105027654, updated on 18-Jun-2024

Summary

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Gene symbol
glrbb
Gene description
glycine receptor, beta b
See related
Ensembl:ENSELUG00000020518
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
glrb
Orthologs
human zebrafish all
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Genomic context

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See glrbb in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 4 NC_047572.1 (26771607..26804127, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG04 NC_025971.4 (8045387..8078366)

Chromosome 4 - NC_047572.1Genomic Context describing neighboring genes Neighboring gene golgi associated kinase 1B Neighboring gene glutamate receptor, ionotropic, AMPA 2b Neighboring gene platelet derived growth factor c Neighboring gene cathepsin O

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellularly glycine-gated chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine receptor, beta b
Names
glycine receptor beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047572.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    26771607..26804127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010899831.4 → XP_010898133.1  glycine receptor, beta b isoform X1

    UniProtKB/TrEMBL
    A0A3P8YY21, A0A6Q2Y865
    Related
    ENSELUP00000021415.1, ENSELUT00000032091.3
    Conserved Domains (3) summary
    TIGR00860
    Location:59 → 502
    LIC; Cation transporter family protein
    pfam02931
    Location:66 → 272
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:279 → 499
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  2. XM_010899840.3 → XP_010898142.1  glycine receptor, beta b isoform X2

    See identical proteins and their annotated locations for XP_010898142.1

    UniProtKB/TrEMBL
    A0A6Q2Y865
    Conserved Domains (3) summary
    TIGR00860
    Location:55 → 498
    LIC; Cation transporter family protein
    pfam02931
    Location:62 → 268
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:275 → 495
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  3. XM_010899847.4 → XP_010898149.1  glycine receptor, beta b isoform X2

    See identical proteins and their annotated locations for XP_010898149.1

    UniProtKB/TrEMBL
    A0A6Q2Y865
    Conserved Domains (3) summary
    TIGR00860
    Location:55 → 498
    LIC; Cation transporter family protein
    pfam02931
    Location:62 → 268
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:275 → 495
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  4. XM_020046166.2 → XP_019901725.1  glycine receptor, beta b isoform X4

    Conserved Domains (1) summary
    cl27321
    Location:59 → 315
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain

  5. XM_020046165.2 → XP_019901724.1  glycine receptor, beta b isoform X3

    Conserved Domains (1) summary
    cl27321
    Location:59 → 307
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
Nucleotide Protein
Heading Accession and Version

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