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tecpr2 tectonin beta-propeller repeat containing 2 [ Esox lucius (northern pike) ]

Gene ID: 105023586, updated on 18-Jun-2024

Summary

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Gene symbol
tecpr2
Gene description
tectonin beta-propeller repeat containing 2
See related
Ensembl:ENSELUG00000004453
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See tecpr2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
21
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 15 NC_047583.1 (25388573..25414262, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG15 NC_025982.4 (25615949..25641498, complement)

Chromosome 15 - NC_047583.1Genomic Context describing neighboring genes Neighboring gene REST corepressor 1 Neighboring gene ankyrin repeat domain 9 Neighboring gene zinc finger protein 839 Neighboring gene cyclin-dependent kinase 2 interacting protein Neighboring gene ADP-ribosylserine hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tectonin beta-propeller repeat-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047583.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    25388573..25414262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010892909.5 → XP_010891211.4  tectonin beta-propeller repeat-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3P8XJ42
    Related
    ENSELUP00000087188.1, ENSELUT00000110263.1
    Conserved Domains (6) summary
    COG2319
    Location:52 → 377
    WD40; WD40 repeat [General function prediction only]
    PRK08691
    Location:563 → 740
    PRK08691; DNA polymerase III subunits gamma and tau; Validated
    sd00039
    Location:97 → 142
    7WD40; WD40 repeat [structural motif]
    pfam06462
    Location:973 → 1002
    Hyd_WA; Propeller
    pfam12894
    Location:107 → 168
    ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
    pfam19193
    Location:1149 → 1347
    Tectonin; Tectonin domain

  2. XM_010892910.5 → XP_010891212.4  tectonin beta-propeller repeat-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A3P8XJ42
    Related
    ENSELUP00000003188.3, ENSELUT00000014441.3
    Conserved Domains (6) summary
    COG2319
    Location:36 → 361
    WD40; WD40 repeat [General function prediction only]
    PRK08691
    Location:547 → 724
    PRK08691; DNA polymerase III subunits gamma and tau; Validated
    sd00039
    Location:81 → 126
    7WD40; WD40 repeat [structural motif]
    pfam06462
    Location:957 → 986
    Hyd_WA; Propeller
    pfam12894
    Location:91 → 152
    ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
    pfam19193
    Location:1133 → 1331
    Tectonin; Tectonin domain
Nucleotide Protein
Heading Accession and Version

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