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prim1 DNA primase subunit 1 [ Esox lucius (northern pike) ]

Gene ID: 105014010, updated on 18-Jun-2024

Summary

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Gene symbol
prim1
Gene description
DNA primase subunit 1
See related
Ensembl:ENSELUG00000015419
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 12 NC_047580.1 (6080262..6088193)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG12 NC_025979.4 (31437414..31445319, complement)

Chromosome 12 - NC_047580.1Genomic Context describing neighboring genes Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 Neighboring gene rho-related GTP-binding protein Rho6 Neighboring gene nascent polypeptide associated complex subunit alpha Neighboring gene small nucleolar RNA SNORD59 Neighboring gene small nucleolar RNA SNORD59

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA primase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication, synthesis of primer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha DNA polymerase:primase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA primase small subunit
Names
primase (DNA) subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047580.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    6080262..6088193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010875950.3 → XP_010874252.1  DNA primase small subunit

    UniProtKB/TrEMBL
    A0A3P9A4S9
    Related
    ENSELUP00000086471.1, ENSELUT00000107158.1
    Conserved Domains (1) summary
    cd04860
    Location:29 → 348
    AE_Prim_S; AE_Prim_S: primase domain similar to that found in the small subunit of archaeal and eukaryotic (A/E) DNA primases. Primases are DNA-dependent RNA polymerases which synthesis the short RNA primers required for DNA replication. In addition to its ...
Nucleotide Protein
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