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DCLRE1C DNA cross-link repair 1C [ Bison bison bison ]

Gene ID: 105003031, updated on 13-Mar-2024

Summary

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Gene symbol
DCLRE1C
Gene description
DNA cross-link repair 1C
See related
Ensembl:ENSBBBG00000002956
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See DCLRE1C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495023.1 (11997517..12032455, complement)

NW_011495023.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 14 Neighboring gene SUV39H2 histone lysine methyltransferase Neighboring gene meiosis/spermiogenesis associated 1 Neighboring gene oleoyl-ACP hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495023.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protection from non-homologous end joining at telomere IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein artemis

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495023.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    11997517..12032455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010859957.1 → XP_010858259.1  protein artemis isoform X4

    UniProtKB/TrEMBL
    A0A6P3J0P5
    Related
    ENSBBBP00000004899.1, ENSBBBT00000007228.1
    Conserved Domains (3) summary
    pfam07522
    Location:124 → 228
    DRMBL; DNA repair metallo-beta-lactamase
    pfam15434
    Location:410 → 483
    FAM104; Family 104
    cl23716
    Location:7 → 56
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

  2. XM_010859956.1 → XP_010858258.1  protein artemis isoform X3

    UniProtKB/TrEMBL
    A0A6P3IVA4
    Conserved Domains (3) summary
    pfam07522
    Location:124 → 271
    DRMBL; DNA repair metallo-beta-lactamase
    pfam15434
    Location:453 → 526
    FAM104; Family 104
    cl23716
    Location:7 → 56
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

  3. XM_010859954.1 → XP_010858256.1  protein artemis isoform X1

    UniProtKB/TrEMBL
    A0A6P3IVA1
    Conserved Domains (3) summary
    pfam07522
    Location:239 → 386
    DRMBL; DNA repair metallo-beta-lactamase
    pfam15434
    Location:568 → 641
    FAM104; Family 104
    cd16297
    Location:1 → 171
    artemis-SNM1C-like_MBL-fold; artemis-SNM1C and related proteins; MBL-fold metallo-hydrolase domain

  4. XM_010859955.1 → XP_010858257.1  protein artemis isoform X2

    UniProtKB/TrEMBL
    A0A6P3J3K6
    Related
    ENSBBBP00000004908.1, ENSBBBT00000007215.1
    Conserved Domains (3) summary
    pfam07522
    Location:239 → 343
    DRMBL; DNA repair metallo-beta-lactamase
    pfam15434
    Location:525 → 598
    FAM104; Family 104
    cd16297
    Location:1 → 171
    artemis-SNM1C-like_MBL-fold; artemis-SNM1C and related proteins; MBL-fold metallo-hydrolase domain
Nucleotide Protein
Heading Accession and Version

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