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tank TRAF family member-associated NFKB activator [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104955248, updated on 12-Mar-2024

Summary

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Gene symbol
tank
Gene description
TRAF family member-associated NFKB activator
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011357368.1 (4648630..4656592, complement)

NW_011357368.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 4 member 10b Neighboring gene T-box brain transcription factor 1b Neighboring gene RNA-binding motif, single-stranded-interacting protein 1-like Neighboring gene CD302 molecule

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011357368.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF family member-associated NF-kappa-B activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011357368.1 Reference NC01 Primary Assembly

    Range
    4648630..4656592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010782530.1 → XP_010780832.1  TRAF family member-associated NF-kappa-B activator isoform X2

    UniProtKB/TrEMBL
    A0A6I9NXW7
    Conserved Domains (1) summary
    pfam12845
    Location:111 → 161
    TBD; TBD domain

  2. XM_010782529.1 → XP_010780831.1  TRAF family member-associated NF-kappa-B activator isoform X1

    UniProtKB/TrEMBL
    A0A6I9P2T7
    Conserved Domains (1) summary
    pfam12845
    Location:111 → 163
    TBD; TBD domain
Nucleotide Protein
Heading Accession and Version

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