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gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104949644, updated on 12-Mar-2024

Summary

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Gene symbol
gucy1a1
Gene description
guanylate cyclase 1 soluble subunit alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Also known as
gucy1a3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011349375.1 (63089..71490, complement)

NW_011349375.1Genomic Context describing neighboring genes Neighboring gene fatty acid binding protein 2, intestinal Neighboring gene guanylate cyclase 1 soluble subunit beta 1 Neighboring gene uncharacterized LOC104949649 Neighboring gene ufm1-specific peptidase 2 Neighboring gene cilia and flagella associated protein 97 Neighboring gene solute carrier family 25 member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011349375.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanylate cyclase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxygen levels IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of guanylate cyclase complex, soluble IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanylate cyclase soluble subunit alpha-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011349375.1 Reference NC01 Primary Assembly

    Range
    63089..71490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010776035.1 → XP_010774337.1  guanylate cyclase soluble subunit alpha-3 isoform X1

    UniProtKB/TrEMBL
    A0A6I9NCR4
    Conserved Domains (4) summary
    smart00044
    Location:457 → 646
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    pfam00211
    Location:484 → 671
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07700
    Location:126 → 243
    HNOB; Haem-NO-binding
    pfam07701
    Location:288 → 478
    HNOBA; Heme NO binding associated

  2. XM_010776036.1 → XP_010774338.1  guanylate cyclase soluble subunit alpha-3 isoform X2

    UniProtKB/TrEMBL
    A0A6I9NGX7
    Conserved Domains (4) summary
    smart00044
    Location:457 → 636
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    pfam00211
    Location:484 → 636
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07700
    Location:126 → 243
    HNOB; Haem-NO-binding
    pfam07701
    Location:288 → 478
    HNOBA; Heme NO binding associated
Nucleotide Protein
Heading Accession and Version

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