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amdhd1 amidohydrolase domain containing 1 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104945692, updated on 19-Jun-2024

Summary

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Gene symbol
amdhd1
Gene description
amidohydrolase domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011333040.1 (11481976..11487744)

NW_011333040.1Genomic Context describing neighboring genes Neighboring gene netrin 4 Neighboring gene small nuclear ribonucleoprotein polypeptide F Neighboring gene tetraspanin-9 Neighboring gene UPF0577 protein KIAA1324-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011333040.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables imidazolonepropionase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-histidine catabolic process to glutamate and formamide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable imidazolonepropionase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011333040.1 Reference NC01 Primary Assembly

    Range
    11481976..11487744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010771403.1 → XP_010769705.1  probable imidazolonepropionase

    UniProtKB/TrEMBL
    A0A6I9N6J7
    Conserved Domains (2) summary
    COG1228
    Location:36 → 428
    HutI; Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism]
    cd01296
    Location:43 → 420
    Imidazolone-5PH; Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, ...
Nucleotide Protein
Heading Accession and Version

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