U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

psph phosphoserine phosphatase [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104936532, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
psph
Gene description
phosphoserine phosphatase
See related
Ensembl:ENSLCRG00005007974
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: VII
Exon count:
7
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) VII NC_040017.1 (15305936..15309228, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608613.1 (7016..10497, complement)

Chromosome VII - NC_040017.1Genomic Context describing neighboring genes Neighboring gene elastin a Neighboring gene nipsnap homolog 2 Neighboring gene uncharacterized LOC104936526 Neighboring gene small nucleolar RNA SNORA15 Neighboring gene small nucleolar RNA SNORA15

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-phosphoserine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phosphoserine phosphatase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040017.1 Reference L_crocea_2.0 Primary Assembly

    Range
    15305936..15309228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027280586.1 → XP_027136387.1  phosphoserine phosphatase isoform X1

    Related
    ENSLCRP00005019497.1, ENSLCRT00005019894.1

  2. XM_027280587.1 → XP_027136388.1  phosphoserine phosphatase isoform X2

    Related
    ENSLCRP00005019499.1, ENSLCRT00005019896.1
    Conserved Domains (1) summary
    cd04309
    Location:15 → 216
    HAD_PSP_eu; phosphoserine phosphatase eukaryotic-like, similar to human phosphoserine phosphatase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.