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Nup93 nucleoporin 93 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104872660, updated on 12-Mar-2024

Summary

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Gene symbol
Nup93
Gene description
nucleoporin 93
Locus tag
H920_11647
See related
Ensembl:ENSFDAG00000016289
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900944.1 (9746648..9860841, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011045662.1 (707177..821981, complement)

NW_022900944.1Genomic Context describing neighboring genes Neighboring gene homocysteine inducible ER protein with ubiquitin like domain 1 Neighboring gene solute carrier family 12 member 3 Neighboring gene uncharacterized LOC104872661 Neighboring gene metallothionein-1E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup93
Names
Nuclear pore complex protein Nup93

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900944.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    9746648..9860841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033757856.1 → XP_033613747.1  nuclear pore complex protein Nup93 isoform X2

    UniProtKB/TrEMBL
    A0A091D4C6
    Conserved Domains (1) summary
    pfam04097
    Location:176 → 759
    Nic96; Nup93/Nic96

  2. XM_010638940.3 → XP_010637242.1  nuclear pore complex protein Nup93 isoform X4

    See identical proteins and their annotated locations for XP_010637242.1

    UniProtKB/TrEMBL
    A0A091D4C6
    Conserved Domains (1) summary
    pfam04097
    Location:96 → 679
    Nic96; Nup93/Nic96

  3. XM_033757858.1 → XP_033613749.1  nuclear pore complex protein Nup93 isoform X3

    UniProtKB/TrEMBL
    A0A091D4C6
    Conserved Domains (1) summary
    pfam04097
    Location:133 → 716
    Nic96; Nup93/Nic96

  4. XM_033757860.1 → XP_033613751.1  nuclear pore complex protein Nup93 isoform X4

    UniProtKB/TrEMBL
    A0A091D4C6
    Conserved Domains (1) summary
    pfam04097
    Location:96 → 679
    Nic96; Nup93/Nic96

  5. XM_033757857.1 → XP_033613748.1  nuclear pore complex protein Nup93 isoform X3

    UniProtKB/TrEMBL
    A0A091D4C6
    Conserved Domains (1) summary
    pfam04097
    Location:133 → 716
    Nic96; Nup93/Nic96

  6. XM_010638941.2 → XP_010637243.1  nuclear pore complex protein Nup93 isoform X4

    See identical proteins and their annotated locations for XP_010637243.1

    UniProtKB/TrEMBL
    A0A091D4C6
    Conserved Domains (1) summary
    pfam04097
    Location:96 → 679
    Nic96; Nup93/Nic96

  7. XM_033757855.1 → XP_033613746.1  nuclear pore complex protein Nup93 isoform X1

    UniProtKB/TrEMBL
    A0A091D4C6
    Conserved Domains (1) summary
    pfam04097
    Location:219 → 802
    Nic96; Nup93/Nic96
Nucleotide Protein
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