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Cwc27 CWC27 spliceosome associated cyclophilin [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104871374, updated on 12-Mar-2024

Summary

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Gene symbol
Cwc27
Gene description
CWC27 spliceosome associated cyclophilin
Locus tag
H920_10845
See related
Ensembl:ENSFDAG00000018333
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900913.1 (49362304..49541624)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011045476.1 (2882581..3062745)

NW_022900913.1Genomic Context describing neighboring genes Neighboring gene shisa like 2B Neighboring gene SREK1 interacting protein 1 Neighboring gene zinc finger CCHC-type and RNA-binding motif-containing protein 1-like Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 6 Neighboring gene cytochrome c-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spliceosome-associated protein CWC27 homolog
Names
CWC27 spliceosome associated protein homolog
Peptidyl-prolyl cis-trans isomerase CWC27 like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900913.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    49362304..49541624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010637238.3 → XP_010635540.1  spliceosome-associated protein CWC27 homolog

    UniProtKB/TrEMBL
    A0A091DY58
    Related
    ENSFDAP00000010603.1
    Conserved Domains (2) summary
    cd01925
    Location:8 → 177
    cyclophilin_CeCYP16-like; cyclophilin_CeCYP16-like: cyclophilin-type peptidylprolyl cis- trans isomerase) (PPIase) domain similar to Caenorhabditis elegans cyclophilin 16. C. elegans CeCYP-16, compared to the archetypal cyclophilin Human cyclophilin A has, a reduced ...
    cl02219
    Location:328 → 382
    Bap31; B-cell receptor-associated protein 31-like
Nucleotide Protein
Heading Accession and Version

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