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Pdp1 pyruvate dehydrogenase phosphatase catalytic subunit 1 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104859119, updated on 12-Mar-2024

Summary

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Gene symbol
Pdp1
Gene description
pyruvate dehydrogenase phosphatase catalytic subunit 1
Locus tag
H920_03411
See related
Ensembl:ENSFDAG00000010238
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900917.1 (20722861..20730909, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044462.1 (16377152..16384170, complement)

NW_022900917.1Genomic Context describing neighboring genes Neighboring gene cadherin 17 Neighboring gene uncharacterized LOC109117893 Neighboring gene uncharacterized LOC104859118 Neighboring gene transmembrane protein 67 Neighboring gene RNA binding motif protein 12B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehyrogenase phosphatase catalytic subunit 1
Names
[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900917.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    20722861..20730909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010619625.3 → XP_010617927.1  pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A091EII1
    Related
    ENSFDAP00000017900.1
    Conserved Domains (1) summary
    cd00143
    Location:168 → 584
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_010619626.3 → XP_010617928.1  pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A091EII1
    Conserved Domains (1) summary
    cd00143
    Location:109 → 525
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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