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Prickle2 prickle planar cell polarity protein 2 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104849949, updated on 12-Mar-2024

Summary

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Gene symbol
Prickle2
Gene description
prickle planar cell polarity protein 2
Locus tag
H920_16031
See related
Ensembl:ENSFDAG00000018099
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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See Prickle2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900940.1 (47166371..47449681, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046613.1 (1496157..1775497)

NW_022900940.1Genomic Context describing neighboring genes Neighboring gene ataxin 7 Neighboring gene proteasome 26S subunit, non-ATPase 6 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 9 Neighboring gene uncharacterized LOC117283618

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prickle-like protein 2
Names
Prickle-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900940.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    47166371..47449681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033757020.1 → XP_033612911.1  prickle-like protein 2

    UniProtKB/TrEMBL
    A0A091DIG3
    Conserved Domains (4) summary
    cd09415
    Location:130 → 188
    LIM1_Prickle; The first LIM domain of Prickle
    cd09418
    Location:193 → 248
    LIM2_Prickle; The second LIM domain of Prickle
    cd09420
    Location:253 → 311
    LIM3_Prickle; The third LIM domain of Prickle
    cd09827
    Location:26 → 122
    PET_Prickle; The PET domain of Prickle
Nucleotide Protein
Heading Accession and Version

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