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ALMS1 ALMS1 centrosome and basal body associated protein [ Corvus cornix cornix ]

Gene ID: 104697656, updated on 3-Aug-2024

Summary

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Gene symbol
ALMS1
Gene description
ALMS1 centrosome and basal body associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See ALMS1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 4 NC_046334.1 (72448905..72499283)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010960137.1 (467572..507848, complement)

Chromosome 4 - NC_046334.1Genomic Context describing neighboring genes Neighboring gene F-box protein 41 Neighboring gene early growth response 4 Neighboring gene ADAM metallopeptidase domain 33 Neighboring gene GDNF family receptor alpha-4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Alstrom syndrome protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046334.1 Reference ASM73873v5 Primary Assembly

    Range
    72448905..72499283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039551602.1 → XP_039407536.1  Alstrom syndrome protein 1

    Conserved Domains (2) summary
    PHA03247
    Location:1395 → 1900
    PHA03247; large tegument protein UL36; Provisional
    pfam15309
    Location:2501 → 2630
    ALMS_motif; ALMS motif
Nucleotide Protein
Heading Accession and Version

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